
The Bells of Saint John - S7-E8
Continuity mistake: When Clara and the Doctor watch the lights going out, they first stand in front of the chair, but when the Doctor notes that some planes have WiFi, they stand behind the chair. That chair switches from in front of them to behind them another couple of times. (00:25:03)
Time Crash - S3-E15
Continuity mistake: At the end of "Last of the Time Lords", the Doctor flicks two switches on the console just before the Titanic hits. In the same scene in "Time Crash", the last control he hits is a large button.
Plot hole: Near the end of the episode, the part-human Doctor is said to have all of the memories of the original Doctor. If this is true, then the part-human Doctor should remember the time the original Doctor spent with Rose, so shouldn't commit genocide or need Rose to help him to not be a man of killing.
Revealing mistake: The 'earthquake' that takes place in this episode results in CGI-created cracks in the pavement that are very unconvincing. They do not appear to displace anything and - in a related continuity error - the cracks disappear in shots taken from ground level (the cracks are only visible in high-level 'looking down' shots). (00:34:30)

Continuity mistake: When Rose presents her mother with the Bazoolium, she's holding it in her left hand. When the view switches to look at Jackie, it shifts to Rose's right hand and then immediately back to her left when the view restores to the original vantage point. (00:02:45)
Father's Day - S1-E8
Plot hole: In "Aliens of London", it is established on a 'missing person' poster that Rose Tyler is approximately 19 years of age in March 2005 (The poster says 'missing since 6 March 2005'). This means that she must have been born prior to March 1986. However, in "Father's Day", which is dated 7 November 1987, Rose is still a baby in her mother's arms, when she should be a toddler aged approx two.
Revealing mistake: The Doctor and Rose locate the "metal" hatch that leads down into the Nestene Consciousness' lair. Watch carefully after the Doctor removes the "metal" hatch and moves it aside. The entire hatch pops up a second later. This is because it is plastic and it was suctioned to the floor.
Continuity mistake: When Amy's dad stands up to present his speech at her wedding, a tear runs down the right side of Amy's face. In the next shot of her the right side of her face is completely dry.
The Christmas Invasion - S2-E2
Audio problem: When the Doctor is proving his identity to Harriet Jones by telling her about when they were trapped together at Downing Street, his words don't match the movements of his jaw when we see him from behind - the timing's all off. (00:40:55)

Revealing mistake: During the scene in which the Doctor is climbing the transmitter, there is a shot in which he is viewed from above and is then struck by lightning. In this shot, the Doctor's foot disappears briefly as it leaves the green screen on the ground under the actor. (00:38:25)

Deliberate mistake: When Jack is scanning the gas mask people, he has a scanner on his right wrist. However, when he shows Rose and the Doctor his image of the Chula warship, the scanner is on his left wrist. The makers flipped the stretch of film, according to the commentary, to make the shot work. (00:37:45)

Continuity mistake: When the Doctor is shown talking to the Daleks on their spaceship, he is standing several metres away. But the people viewing him from Earth see him standing right in front of them. (00:23:33)
Continuity mistake: When the three bride Autons attack Jackie, and they open their hands one at a time, it is clear that when the second Auton opens its hand, all three are already open. After it cuts to Rose, and back to Jackie again, the third one opens (even though we just saw it already open). (00:38:15)

Rise of the Cybermen (1) - S2-E8
Visible crew/equipment: Everytime we see a close up of Mickey's grandmother's face, we can see the crew and camera reflected in her glasses. (00:22:20)

Factual error: When Rose is locked in the room and the bodies come toward her, you can see a modern-day electric light-switch to the side of the door she's trying to get through. When the Doctor hears her screaming for help and runs for her, you can see a central heating radiator. In fact, the undertaker's house has at least two radiators in different hallways. Both are wildly anachronistic for the time period. (00:16:30 - 00:17:08)
Suggested correction: While the light switch is ahead of its time, the heating radiator was invented by Franz San Galli in 1855 and was immediately popular. It's possible that by 1869, when the episode takes place, that Mr. Sneed would have one.
Continuity mistake: At the start when we see Rose on the bus, a bald man sits down on the seat behind her. However, when the camera is inside the bus, he is sitting two seats behind her, without enough time for him to move. (00:00:20)
Dark Water - S8-E11
Factual error: When Clara is speaking on the phone to Danny at the start of the episode her phone shows the call waiting screen for an incoming call from him. (00:02:25)

The Angels Take Manhattan - S7-E6
Continuity mistake: When they are back in the cemetery at the end, the Angel shows up right behind Rory. In the first shot facing Rory, as the camera zooms in on a close-up of the Angel, the Angel's right arm/hand is pointing straight out, and its left open hand is up in a grabbing position. After River asks where the hell it came from, in the Angel's next close-up and all subsequent close-ups, its arm/hand positions are reversed - left hand is pointing straight out and its right hand is up. Yet in every shot of the Doctor, River and Amy together, in the foreground we see the Angel's left hand is up in the grabbing position. (00:37:35)