Continuity mistake: When Rose is sitting on a bench and she gets a news report on her phone, look at the top of the phone screen - it says the time is 11:35. However, several minutes later, when the Doctor and Mickey find Rose, the clock says it's only 11:36. (00:15:05)
Other mistake: When the Doctor finds the crystal and blows on it, it glows brightly. While it lights up his face as it should, the backs of his hands light up, apparently from the crystal. This is not possible, as the light comes from in front when the crystal is inside the Doctor's hands. (00:14:55)Movie Nut
Continuity mistake: In this episode's TARDIS scenes, the yellow padded seat is positioned so that it's on the side of the console closer to the door, so people sitting on it are facing away from the door. In all other episodes featuring this version of the console room, the seat is positioned on the side of the console opposite the door.
Other mistake: Alternate Jackie is said to be turning 40. According to a newspaper Mickey finds early in the episode, the parallel universe is in the same year as the main universe. When Jackie's age (she claims to be only turning 39) is announced at the party, Rose does not in any way react as though that's different from the age of main-universe Jackie. The problem is that, given that Rose was 19 when she met the Doctor, and it has been, for main Jackie and Mickey, likely at least two years since the events of "Rose" (remember Rose's one-year accidental disappearance), this means Jackie would have had to have gotten married, and had Rose, before she turned twenty, and been a widow by the time she was twenty. Given that Jackie is from the UK, a first-world country, and that she seems to be in her twenties in "Father's Day", this is highly unlikely.